Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs4302566 chr5:72641086 C/G 1.56E-9 176 15.57 14.23 2.2 KM Plot
PAAD rs4329702 chr11:125579839 C/G 4.72E-5 178 16.03 11.6 4.1 KM Plot
PAAD rs4332172 chr8:18840501 T/C 0.000108 171 15.67 13.87 16.07 KM Plot
PAAD rs4350771 chr2:70510152 G/A 0 177 15.37 17.32 1.03 KM Plot
PAAD rs4373351 chr6:45276324 T/C 0.000138 177 16.22 16.1 12.2 KM Plot
PAAD rs4446571 chr6:45257662 T/C 8.99E-5 175 16.37 15.93 12.2 KM Plot
PAAD rs4447242 chr12:104720708 T/G 1.12E-12 176 1.37 15.8 15.53 KM Plot
PAAD rs448433 chr5:94606247 C/T 2.17E-8 178 2.15 18.48 14.48 KM Plot
PAAD rs4502051 chr12:104695569 A/T 1.12E-12 176 1.37 15.8 15.53 KM Plot
PAAD rs4510673 chr6:45350107 A/G 0.000158 178 11.77 16.13 16.22 KM Plot
PAAD rs4533410 chr19:23139083 G/A 8.24E-13 178 1.37 15.27 15.57 KM Plot
PAAD rs455516 chr5:94604949 C/T 4.88E-8 177 2.15 17.37 14.6 KM Plot
PAAD rs45589039 chr19:49355385 C/T 1.22E-12 174 16.17 12.87 1.37 KM Plot
PAAD rs456777 chr5:94607451 A/T 2.27E-8 177 2.15 17.5 14.48 KM Plot
PAAD rs4567961 chr2:70520875 A/G 0 178 1.03 17.32 15.4 KM Plot